BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008G08LP1|AL425925
(809 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1736 1598 0.0
>3x_Contig1736
Length = 21222
Score = 1598 bits (805), Expect = 0.0
Identities = 807/809 (99%)
Strand = Plus / Minus
Query: 1 gatcaaaaacaagaatttaaaatcatcatttccctattcaatccggaaagattctgggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19299 gatcaaaaacaagaatttaaaatcatcatttccctattcaatccggaaagattctgggaa 19240
Query: 61 gtcacatttttatccattaaccacggtcgcgtacctcgtaaagttatcaacgaccttgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19239 gtcacatttttatccattaaccacggtcgcgtacctcgtaaagttatcaacgaccttgag 19180
Query: 121 caagtgctatccaaaatttgtcagtataacaacaaagatcctgacaatgcttcactaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19179 caagtgctatccaaaatttgtcagtataacaacaaagatcctgacaatgcttcactaaaa 19120
Query: 181 gacactaagaatgatacgaaggcgataccctcgccgaagattgacatcctcgaagaagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19119 gacactaagaatgatacgaaggcgataccctcgccgaagattgacatcctcgaagaagtg 19060
Query: 241 gatgatttggagtatctattggctgagaatgttcctgaccaggagcagataccagaagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19059 gatgatttggagtatctattggctgagaatgttcctgaccaggagcagataccagaagca 19000
Query: 301 gaaagtctggaactaaatgaatcatcaaccatatcttccatcagtatggaacactcacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18999 gaaagtctggaactaaatgaatcatcaaccatatcttccatcagtatggaacactcacta 18940
Query: 361 gtacagtctggagatgtcgtaaatwagacattcaaacaagcattaggaagaataaaaccc 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 18939 gtacagtctggagatgtcgtaaataagacattcaaacaagcattaggaagaataaaaccc 18880
Query: 421 attgactttaacacaagagcagaaagcagtaggtacaaaaggttcagctcttttcactct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18879 attgactttaacacaagagcagaaagcagtaggtacaaaaggttcagctcttttcactct 18820
Query: 481 gcatttttagatgttcctcgcataagcgcagaatatcaacattctttacaagataaaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18819 gcatttttagatgttcctcgcataagcgcagaatatcaacattctttacaagataaaaga 18760
Query: 541 cggtcgatcagtgttccgactgcaattgattacaagtctgtttccaatcacgacatgaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18759 cggtcgatcagtgttccgactgcaattgattacaagtctgtttccaatcacgacatgaga 18700
Query: 601 ragggtgttgattttgacaaggtaagttggatggatgtcacattcgaagattttccggag 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18699 aagggtgttgattttgacaaggtaagttggatggatgtcacattcgaagattttccggag 18640
Query: 661 atatgaccgacaatattgcaggcattgtagcagtattccaggtttttcctacatgtcaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18639 atatgaccgacaatattgcaggcattgtagcagtattccaggtttttcctacatgtcaat 18580
Query: 721 ttataactcaatgcacaaactgaattatgtatgtggcgggttctacgtacattggaccat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18579 ttataactcaatgcacaaactgaattatgtatgtggcgggttctacgtacattggaccat 18520
Query: 781 aaactcaacaattttttgtttaataatca 809
|||||||||||||||||||||||||||||
Sbjct: 18519 aaactcaacaattttttgtttaataatca 18491
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5889
Number of Sequences: 1807
Number of extensions: 5889
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 809
length of database: 10,358,551
effective HSP length: 16
effective length of query: 793
effective length of database: 10,329,639
effective search space: 8191403727
effective search space used: 8191403727
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)